Publications

Conference papers, peer-reviewed journal articles, and other scholarly works are the result of your hard work of which HYAK was one helping hand. Please consider citing or acknowleding HYAK in your final work and then let us know so it can be considered to appear in our select publication list.

The HYAK Consortium. "Title TBD." arXiv:4444.55555 (2021)

Select Publications

These are select works that were produced using a HYAK cluster in any given year. While hundreds of papers are produced each year using HYAK, we limit the select list below to 10 for the sake of brevity. If you would like your publication to be considered for inclusion onto this list please e-mail us with the citation.

Aeronautics and Astronautics

  1. TE Benedett and CJ Hansen. "Effect of geometric and magnetic boundary conditions on magnetic islands in 3D force-free ideal MHD equilibria." Nuclear Fusion 61 (3) 036022 (2021) DOI: 10.1088/1741-4326/abd41c

Chemical Engineering

  1. A. Joseph, C. Nyambura1,D. Bondurant, K. Corry, D. Beebout, T. Wood, Jim Pfaendtner, E. Nance, “Formulation and Efficacy of Catalase-Loaded Nanoparticles for the Treatment of Neonatal Hypoxic-Ischemic Encephalopathy”, Pharmaceutics, 2021, 13(8), 1131. DOI: 10.3390/pharmaceutics13081131 110. J. Prelesnik1, R. Alberstein, S. Zhang, H. Pyles, D. Baker, J. Pfaendtner, J. De Yoreo, A. Tezcan, R.. Remsing, C. J. Mundy, “Ion-dependent protein–surface interactions from intrinsic solvent response”, PNAS, 2021, 118(26), e2025121118. DOI: 10.1073/pnas.2025121118 108. C. Jia, S. Xie, W. Zhang, N. Intan2, J. Sampath2, J. Pfaendtner, H. Lin, “Deconstruction of high-density polyethylene into liquid hydrocarbon fuels and lubricants by hydrogenolysis over Ru catalyst”, Chem. Cat., 2021, 1(2), 437-455. DOI: 10.1016/j.checat.2021.04.002 107. J. Ludwig1, J. Smith, J. Pfaendtner, “Analyzing the Long Time-Scale Dynamics of Uremic Toxins Bound to Sudlow Site II in Human Serum Albumin”, J. Phys. Chem. B., 2021, 125(11), 2910-2920. DOI: 10.1021/acs.jpcb.1c00221 106. S. Roeters, T. Golbek, M. Bregnhøj, T. Drace, S. Alamdari1, W. Roseboom, G. Kramer, T Šantl-Temkiv, K. Finster, J. Pfaendtner, S. Woutersen, T. Boesen, T. Weidner, “Ice-nucleating proteins are activated by low temperatures to control the structure of interfacial water” Nat Commun, 2021, 12, 1183 . DOI: 10.1038/s41467-021-21349-3 105. N. Intan2, J. Pfaendtner, “Effect of Fluoroethylene Carbonate Additives on the Initial Formation of the Solid Electrolyte Interphase on an Oxygen-Functionalized Graphitic Anode in Lithium-Ion Batteries”, 2021, 13(7), 8169-8180: DOI: 10.1021/acsami.0c18414

Chemistry

  1. Zhang, L., Kang, C., Zhang, G., Pan, Z., Huang, Z., Xu, S., Rao, H., Liu, H., Wu, S., Wu, X. and Li, X., 2021. All‐Inorganic CsPbI3 Quantum Dot Solar Cells with Efficiency over 16% by Defect Control. Advanced Functional Materials, 31(4), p.2005930. DOI: 10.1002/adfm.202005930

Computer Science

  1. Alisa Liu, Maarten Sap, Ximing Lu, Swabha Swayamdipta, Chandra Bhagavatula, Noah A. Smith, Yejin Choi. 2021. DExperts: Decoding-Time Controlled Text Generation with Experts and Anti-Experts. Proceedings of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing. Virtual Event, USA. DOI: 10.18653/v1/2021.acl-long.522
  2. Xin Liu, Ziheng Jiang, Josh Fromm, Xuhai Xu, Shwetak Patel, and Daniel McDuff. 2021. MetaPhys: Few-Shot Adaptation for Non-Contact Physiological Measurement. ACM Conference on Health, Inference, and Learning (ACM CHIL ’21) April 8–10, 2021, Virtual Event, USA. ACM, New York, NY, USA, 10 pages. 10.1145/3450439.3451870

Physics

  1. AA Kaptanoglu, KD Morgan, CJ Hansen, and SL Brunton. "Physics-constrained, low-dimensional models for magnetohydrodynamics: First-principles and data-driven approaches." Physical Review E 104(1), 015206 (2021) DOI: 10.1103/PhysRevE.104.015206
  2. Montague Z, Lv H, Otwinowski J, DeWitt WS, Isacchini G, Yip GK, Ng WW, Tsang OTY, Yuan M, Liu H, and Wilson IA, 2021. Dynamics of B cell repertoires and emergence of cross-reactive responses in patients with different severities of COVID-19. Cell Reports, 35(8), p.109173. DOI: 10.1016/j.celrep.2021.109173